Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
P06344 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.53□□□□□ -0.56
P06344 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.53□□□□□ -0.56
P06344 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.53□□□□□ -0.56
P06344 Gm19184-201ENSMUST00000196798 928 ntBASIC11.53□□□□□ -0.56
P06344 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.53□□□□□ -0.56
P06344 Gm19163-201ENSMUST00000223313 780 ntBASIC11.53□□□□□ -0.56
P06344 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.53□□□□□ -0.56
P06344 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P06344 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P06344 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
P06344 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P06344 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
P06344 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
P06344 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.52□□□□□ -0.56
P06344 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.52□□□□□ -0.56
P06344 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P06344 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.52□□□□□ -0.56
P06344 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P06344 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P06344 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
P06344 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
P06344 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
P06344 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
P06344 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
P06344 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
P06344 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P06344 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Gm37042-201ENSMUST00000193816 581 ntBASIC11.52□□□□□ -0.57
P06344 Gm19931-201ENSMUST00000198920 368 ntBASIC11.52□□□□□ -0.57
P06344 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.52□□□□□ -0.57
P06344 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.52□□□□□ -0.57
P06344 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
P06344 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.52□□□□□ -0.57
P06344 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
P06344 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P06344 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.51□□□□□ -0.57
P06344 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P06344 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.51□□□□□ -0.57
P06344 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gm22018-201ENSMUST00000104357 131 ntBASIC11.51□□□□□ -0.57
P06344 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P06344 Gm12363-201ENSMUST00000122250 668 ntBASIC11.51□□□□□ -0.57
P06344 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.51□□□□□ -0.57
P06344 Gm37008-201ENSMUST00000195712 319 ntBASIC11.51□□□□□ -0.57
P06344 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gm45880-201ENSMUST00000213041 853 ntBASIC11.51□□□□□ -0.57
P06344 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Snora73a-201ENSMUST00000082453 205 ntBASIC11.51□□□□□ -0.57
P06344 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P06344 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P06344 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms