Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa3P02831 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxa3P02831 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa3P02831 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa3P02831 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa3P02831 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm25261-201ENSMUST00000157416 134 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm38002-201ENSMUST00000193255 180 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm7399-201ENSMUST00000032395 858 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.85□□□□□ -0.67
Hoxa3P02831 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa3P02831 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa3P02831 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Gm37008-201ENSMUST00000195712 319 ntBASIC10.84□□□□□ -0.67
Hoxa3P02831 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.84□□□□□ -0.67
Hoxa3P02831 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.84□□□□□ -0.67
Hoxa3P02831 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxa3P02831 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Hoxa3P02831 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms