Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm29155-201ENSMUST00000185910 269 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm25880-201ENSMUST00000104331 132 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm12058-201ENSMUST00000118614 437 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm14832-201ENSMUST00000121289 322 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm14460-201ENSMUST00000121511 639 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col5a1O88207 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.49□□□□□ -0.57
Col5a1O88207 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col5a1O88207 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col5a1O88207 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.48□□□□□ -0.57
Col5a1O88207 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.48□□□□□ -0.57
Col5a1O88207 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.48□□□□□ -0.57
Col5a1O88207 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.48□□□□□ -0.57
Col5a1O88207 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Col5a1O88207 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.48□□□□□ -0.57
Col5a1O88207 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col5a1O88207 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Col5a1O88207 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.47□□□□□ -0.57
Col5a1O88207 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col5a1O88207 Gm32999-201ENSMUST00000192693 562 ntBASIC11.47□□□□□ -0.57
Col5a1O88207 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Col5a1O88207 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.47□□□□□ -0.57
Col5a1O88207 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col5a1O88207 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col5a1O88207 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms