Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.44■□□□□ 0.22
Ubr1O70481 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ubr1O70481 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ubr1O70481 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12616-201ENSMUST00000118594 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12624-201ENSMUST00000177615 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12621-201ENSMUST00000177760 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12615-201ENSMUST00000177970 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12622-201ENSMUST00000177975 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12627-201ENSMUST00000178412 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12625-201ENSMUST00000179122 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12614-201ENSMUST00000179586 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm12613-201ENSMUST00000180323 382 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Mir7032-201ENSMUST00000185154 79 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm44551-201ENSMUST00000208804 171 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm11509-201ENSMUST00000117358 325 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm7851-201ENSMUST00000117574 323 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.43■□□□□ 0.22
Ubr1O70481 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm9211-201ENSMUST00000182882 975 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.43■□□□□ 0.22
Ubr1O70481 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.43■□□□□ 0.22
Ubr1O70481 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ubr1O70481 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.42■□□□□ 0.22
Ubr1O70481 Gm11667-201ENSMUST00000119828 486 ntBASIC16.42■□□□□ 0.22
Ubr1O70481 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.42■□□□□ 0.22
Ubr1O70481 Mir7686-201ENSMUST00000200604 57 ntBASIC16.42■□□□□ 0.22
Ubr1O70481 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.42■□□□□ 0.22
Ubr1O70481 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ubr1O70481 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ubr1O70481 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ubr1O70481 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ubr1O70481 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ubr1O70481 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ubr1O70481 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ubr1O70481 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubr1O70481 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubr1O70481 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubr1O70481 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ubr1O70481 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubr1O70481 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Ubr1O70481 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.41■□□□□ 0.22
Ubr1O70481 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ubr1O70481 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms