Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.8□□□□□ -0.36
Pdlim1O70400 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.79□□□□□ -0.36
Pdlim1O70400 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gm14704-201ENSMUST00000120300 874 ntBASIC12.79□□□□□ -0.36
Pdlim1O70400 Gm13813-201ENSMUST00000120998 787 ntBASIC12.79□□□□□ -0.36
Pdlim1O70400 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Snora73a-201ENSMUST00000082453 205 ntBASIC12.79□□□□□ -0.36
Pdlim1O70400 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.79□□□□□ -0.36
Pdlim1O70400 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pdlim1O70400 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdlim1O70400 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm12363-201ENSMUST00000122250 668 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm23363-201ENSMUST00000175024 79 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pdlim1O70400 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pdlim1O70400 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.78□□□□□ -0.36
Pdlim1O70400 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdlim1O70400 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pdlim1O70400 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdlim1O70400 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms