Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
BckdkO55028 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.01□□□□□ -0.49
BckdkO55028 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
BckdkO55028 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.01□□□□□ -0.49
BckdkO55028 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
BckdkO55028 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
BckdkO55028 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BckdkO55028 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12□□□□□ -0.49
BckdkO55028 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Gm13886-201ENSMUST00000117876 1183 ntBASIC12□□□□□ -0.49
BckdkO55028 Gm11803-201ENSMUST00000119966 444 ntBASIC12□□□□□ -0.49
BckdkO55028 Gm10156-201ENSMUST00000122364 462 ntBASIC12□□□□□ -0.49
BckdkO55028 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Gm17420-201ENSMUST00000164753 153 ntBASIC12□□□□□ -0.49
BckdkO55028 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
BckdkO55028 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Gm40466-201ENSMUST00000212174 422 ntBASIC12□□□□□ -0.49
BckdkO55028 AC122459.1-201ENSMUST00000228373 885 ntBASIC12□□□□□ -0.49
BckdkO55028 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
BckdkO55028 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BckdkO55028 Gm7553-201ENSMUST00000185805 1426 ntBASIC12□□□□□ -0.49
BckdkO55028 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BckdkO55028 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.99□□□□□ -0.49
BckdkO55028 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Gm8062-201ENSMUST00000139696 444 ntBASIC11.99□□□□□ -0.49
BckdkO55028 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.99□□□□□ -0.49
BckdkO55028 Gm37424-201ENSMUST00000191727 561 ntBASIC11.99□□□□□ -0.49
BckdkO55028 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.99□□□□□ -0.49
BckdkO55028 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms