Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limk2O54785 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.12□□□□□ -0.31
Limk2O54785 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Gm13350-201ENSMUST00000120519 479 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.12□□□□□ -0.31
Limk2O54785 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.12□□□□□ -0.31
Limk2O54785 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.12□□□□□ -0.31
Limk2O54785 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.12□□□□□ -0.31
Limk2O54785 Gm7783-201ENSMUST00000204795 781 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Limk2O54785 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.12□□□□□ -0.31
Limk2O54785 Gm45930-201ENSMUST00000221330 292 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.12□□□□□ -0.31
Limk2O54785 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.12□□□□□ -0.31
Limk2O54785 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.12□□□□□ -0.31
Limk2O54785 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.12□□□□□ -0.31
Limk2O54785 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limk2O54785 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Limk2O54785 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Limk2O54785 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.11□□□□□ -0.31
Limk2O54785 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Gm12291-201ENSMUST00000121627 311 ntBASIC13.11□□□□□ -0.31
Limk2O54785 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.11□□□□□ -0.31
Limk2O54785 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.11□□□□□ -0.31
Limk2O54785 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.11□□□□□ -0.31
Limk2O54785 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Snora73a-201ENSMUST00000082453 205 ntBASIC13.11□□□□□ -0.31
Limk2O54785 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.11□□□□□ -0.31
Limk2O54785 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.11□□□□□ -0.31
Limk2O54785 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.11□□□□□ -0.31
Limk2O54785 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limk2O54785 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limk2O54785 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.1□□□□□ -0.31
Limk2O54785 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms