Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Phox2bO35690 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.21□□□□□ -0.29
Phox2bO35690 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Phox2bO35690 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Phox2bO35690 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.21□□□□□ -0.3
Phox2bO35690 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Phox2bO35690 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Phox2bO35690 AC158595.1-201ENSMUST00000217989 1435 ntBASIC13.21□□□□□ -0.3
Phox2bO35690 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Phox2bO35690 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Phox2bO35690 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm22588-201ENSMUST00000157510 140 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Gm23699-201ENSMUST00000158835 135 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm10925-201ENSMUST00000189941 678 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Gm38280-201ENSMUST00000192610 158 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 AC153968.2-201ENSMUST00000215579 1140 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.2□□□□□ -0.3
Phox2bO35690 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Phox2bO35690 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Phox2bO35690 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Phox2bO35690 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Phox2bO35690 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Phox2bO35690 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.2□□□□□ -0.3
Phox2bO35690 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phox2bO35690 Gm37965-201ENSMUST00000195304 1362 ntBASIC13.2□□□□□ -0.3
Phox2bO35690 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm11667-201ENSMUST00000119828 486 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm28195-201ENSMUST00000186992 372 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Gm37042-201ENSMUST00000193816 581 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Gm31256-201ENSMUST00000194705 506 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm13097-201ENSMUST00000210722 397 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 AC165260.4-201ENSMUST00000225924 724 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Phox2bO35690 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Phox2bO35690 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.19□□□□□ -0.3
Phox2bO35690 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phox2bO35690 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms