Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Daam2-202ENSMUST00000224595 1926 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.73□□□□□ -0.37
Slc1a6O35544 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.73□□□□□ -0.37
Slc1a6O35544 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Mir686-201ENSMUST00000102174 109 ntBASIC12.73□□□□□ -0.37
Slc1a6O35544 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.73□□□□□ -0.37
Slc1a6O35544 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc1a6O35544 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc1a6O35544 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.72□□□□□ -0.37
Slc1a6O35544 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.72□□□□□ -0.37
Slc1a6O35544 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.72□□□□□ -0.37
Slc1a6O35544 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc1a6O35544 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc1a6O35544 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.72□□□□□ -0.37
Slc1a6O35544 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm13813-201ENSMUST00000120998 787 ntBASIC12.71□□□□□ -0.37
Slc1a6O35544 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm38223-201ENSMUST00000194484 695 ntBASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.71□□□□□ -0.37
Slc1a6O35544 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.71□□□□□ -0.37
Slc1a6O35544 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms