Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tcof1O08784 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.12■□□□□ 0.01
Tcof1O08784 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.12■□□□□ 0.01
Tcof1O08784 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tcof1O08784 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Gm45930-201ENSMUST00000221330 292 ntBASIC15.12■□□□□ 0.01
Tcof1O08784 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.12■□□□□ 0.01
Tcof1O08784 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcof1O08784 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Tcof1O08784 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tcof1O08784 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.11■□□□□ 0.01
Tcof1O08784 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.11■□□□□ 0.01
Tcof1O08784 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.11■□□□□ 0.01
Tcof1O08784 Gm3961-201ENSMUST00000204425 994 ntBASIC15.11■□□□□ 0.01
Tcof1O08784 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.11■□□□□ 0.01
Tcof1O08784 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.11■□□□□ 0.01
Tcof1O08784 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.11■□□□□ 0.01
Tcof1O08784 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tcof1O08784 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcof1O08784 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.1■□□□□ 0.01
Tcof1O08784 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.1■□□□□ 0.01
Tcof1O08784 Gm27501-201ENSMUST00000183599 107 ntBASIC15.1■□□□□ 0.01
Tcof1O08784 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.1■□□□□ 0.01
Tcof1O08784 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.1■□□□□ 0.01
Tcof1O08784 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcof1O08784 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.09■□□□□ 0.01
Tcof1O08784 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms