Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Gm11667-201ENSMUST00000119828 486 ntBASIC15.53■□□□□ 0.08
NpcdF8VQB8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Gm6407-201ENSMUST00000176468 549 ntBASIC15.53■□□□□ 0.08
NpcdF8VQB8 Rprl1-202ENSMUST00000198476 238 ntBASIC15.53■□□□□ 0.08
NpcdF8VQB8 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.53■□□□□ 0.08
NpcdF8VQB8 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.53■□□□□ 0.08
NpcdF8VQB8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NpcdF8VQB8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm24749-201ENSMUST00000157838 343 ntBASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm7003-201ENSMUST00000195089 312 ntBASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm6458-201ENSMUST00000211573 635 ntBASIC15.52■□□□□ 0.08
NpcdF8VQB8 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.52■□□□□ 0.08
NpcdF8VQB8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.52■□□□□ 0.08
NpcdF8VQB8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NpcdF8VQB8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NpcdF8VQB8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NpcdF8VQB8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.52■□□□□ 0.07
NpcdF8VQB8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NpcdF8VQB8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NpcdF8VQB8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NpcdF8VQB8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm25043-201ENSMUST00000158604 212 ntBASIC15.51■□□□□ 0.07
NpcdF8VQB8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.51■□□□□ 0.07
NpcdF8VQB8 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.51■□□□□ 0.07
NpcdF8VQB8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NpcdF8VQB8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms