Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm11989-201ENSMUST00000117240 672 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm11362-201ENSMUST00000118838 850 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm12196-201ENSMUST00000120954 262 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm25881-201ENSMUST00000157783 103 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm15881-201ENSMUST00000148792 942 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Ginm1-202ENSMUST00000065124 300 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.12□□□□□ -0.47
Colca2F8VPY8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Colca2F8VPY8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm23596-201ENSMUST00000104304 132 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm16397-201ENSMUST00000122201 494 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Gm37246-201ENSMUST00000192665 835 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.11□□□□□ -0.47
Colca2F8VPY8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms