Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.47■□□□□ 0.07
Ube4aE9Q735 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Gm11439-201ENSMUST00000118598 409 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Rps4l-202ENSMUST00000204242 789 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.46■□□□□ 0.07
Ube4aE9Q735 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4aE9Q735 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.46■□□□□ 0.06
Ube4aE9Q735 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm14832-201ENSMUST00000121289 322 ntBASIC15.45■□□□□ 0.06
Ube4aE9Q735 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm24845-201ENSMUST00000158034 109 ntBASIC15.45■□□□□ 0.06
Ube4aE9Q735 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm27341-201ENSMUST00000183570 106 ntBASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4aE9Q735 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms