Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Gm17831-201ENSMUST00000205579 900 ntBASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc85cE9Q6B2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm11956-201ENSMUST00000119525 512 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm13937-201ENSMUST00000121000 988 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc85cE9Q6B2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Gm7541-201ENSMUST00000118361 535 ntBASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc85cE9Q6B2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.78■□□□□ 0.12
Ccdc85cE9Q6B2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms