Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scaf11E9PZM7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scaf11E9PZM7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scaf11E9PZM7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.74■□□□□ 0.43
Scaf11E9PZM7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scaf11E9PZM7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scaf11E9PZM7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Gm22133-201ENSMUST00000102082 109 ntBASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Gm6867-201ENSMUST00000219165 425 ntBASIC17.73■□□□□ 0.43
Scaf11E9PZM7 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.73■□□□□ 0.43
Scaf11E9PZM7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Gm12628-201ENSMUST00000122193 382 ntBASIC17.72■□□□□ 0.43
Scaf11E9PZM7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scaf11E9PZM7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm8199-201ENSMUST00000121323 823 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm5852-201ENSMUST00000194119 1021 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm5542-201ENSMUST00000195485 1089 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf11E9PZM7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scaf11E9PZM7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms