Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hfm1D3Z4R1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Gm22138-201ENSMUST00000158748 128 ntBASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 AC129219.2-201ENSMUST00000224324 701 ntBASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hfm1D3Z4R1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hfm1D3Z4R1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Gm43184-201ENSMUST00000197247 542 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Gm6905-201ENSMUST00000205729 511 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Gm807-202ENSMUST00000224929 408 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hfm1D3Z4R1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm14724-201ENSMUST00000118400 537 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm18974-201ENSMUST00000221478 1031 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm26448-201ENSMUST00000082446 203 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm11509-201ENSMUST00000117358 325 ntBASIC17.81■□□□□ 0.44
Hfm1D3Z4R1 Gm15573-201ENSMUST00000119487 540 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms