Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brpf3B2KF05 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.33□□□□□ -0.11
Brpf3B2KF05 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brpf3B2KF05 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.33□□□□□ -0.12
Brpf3B2KF05 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Gm14822-201ENSMUST00000122247 291 ntBASIC14.33□□□□□ -0.12
Brpf3B2KF05 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.33□□□□□ -0.12
Brpf3B2KF05 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.33□□□□□ -0.12
Brpf3B2KF05 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brpf3B2KF05 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.32□□□□□ -0.12
Brpf3B2KF05 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.32□□□□□ -0.12
Brpf3B2KF05 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.32□□□□□ -0.12
Brpf3B2KF05 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brpf3B2KF05 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.31□□□□□ -0.12
Brpf3B2KF05 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm19087-201ENSMUST00000191430 946 ntBASIC14.31□□□□□ -0.12
Brpf3B2KF05 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm19078-201ENSMUST00000206311 727 ntBASIC14.31□□□□□ -0.12
Brpf3B2KF05 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Brpf3B2KF05 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms