Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Krt28A6BLY7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Krt28A6BLY7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.27□□□□□ -0.12
Krt28A6BLY7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt28A6BLY7 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm12165-201ENSMUST00000117047 342 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm13045-201ENSMUST00000119019 712 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm12029-201ENSMUST00000120073 832 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm19187-201ENSMUST00000206781 892 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm8285-201ENSMUST00000208293 759 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.27□□□□□ -0.13
Krt28A6BLY7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt28A6BLY7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm14921-201ENSMUST00000118643 908 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm7600-201ENSMUST00000209657 785 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Gm10752-201ENSMUST00000218348 729 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.26□□□□□ -0.13
Krt28A6BLY7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt28A6BLY7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt28A6BLY7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt28A6BLY7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt28A6BLY7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt28A6BLY7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms