Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Rmrp-201ENSMUST00000157463 271 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn3aA2ASI5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Gm11930-201ENSMUST00000117788 190 ntBASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn3aA2ASI5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.27□□□□□ -0.13
Scn3aA2ASI5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms