Protein–RNA interactions for Protein: A2AH22

Ambra1, Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1A2AH22 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ambra1A2AH22 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm9022-201ENSMUST00000182482 992 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.03
Ambra1A2AH22 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ambra1A2AH22 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ambra1A2AH22 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm22138-201ENSMUST00000158748 128 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm37905-201ENSMUST00000195310 341 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm19287-201ENSMUST00000203190 358 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm4157-201ENSMUST00000211647 679 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ambra1A2AH22 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.2■□□□□ 0.02
Ambra1A2AH22 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ambra1A2AH22 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.19■□□□□ 0.02
Ambra1A2AH22 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Ambra1A2AH22 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ambra1A2AH22 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ambra1A2AH22 Gm26286-201ENSMUST00000104166 134 ntBASIC15.19■□□□□ 0.02
Ambra1A2AH22 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ambra1A2AH22 Gm12795-201ENSMUST00000117594 539 ntBASIC15.19■□□□□ 0.02
Ambra1A2AH22 Gm13809-201ENSMUST00000117921 597 ntBASIC15.19■□□□□ 0.02
Ambra1A2AH22 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms