Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cfap99A0A140LIX9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cfap99A0A140LIX9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cfap99A0A140LIX9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm15370-201ENSMUST00000117158 253 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm6023-201ENSMUST00000118217 606 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm14381-201ENSMUST00000122105 414 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm37489-201ENSMUST00000191883 159 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Gm8227-201ENSMUST00000223306 571 ntBASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.45■□□□□ 0.06
Cfap99A0A140LIX9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm16202-201ENSMUST00000117532 544 ntBASIC15.44■□□□□ 0.06
Cfap99A0A140LIX9 Gm8805-201ENSMUST00000117848 313 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms