Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm4875-201ENSMUST00000118257 786 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm10766-202ENSMUST00000194123 606 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm43703-201ENSMUST00000200523 763 ntBASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav6n-6A0A075B6B2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm12151-201ENSMUST00000121374 290 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav6n-6A0A075B6B2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms