Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.6□□□□□ -0.71
Trav18A0A075B656 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gm15920-201ENSMUST00000118998 402 ntBASIC10.59□□□□□ -0.71
Trav18A0A075B656 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gm14057-201ENSMUST00000120631 482 ntBASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.59□□□□□ -0.71
Trav18A0A075B656 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav18A0A075B656 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav18A0A075B656 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.58□□□□□ -0.71
Trav18A0A075B656 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm14350-201ENSMUST00000116642 640 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm18307-201ENSMUST00000206864 949 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm6983-201ENSMUST00000214912 628 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms