Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cx3cr1Q9Z0D9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cx3cr1Q9Z0D9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cx3cr1Q9Z0D9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cx3cr1Q9Z0D9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cx3cr1Q9Z0D9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cx3cr1Q9Z0D9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cx3cr1Q9Z0D9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cx3cr1Q9Z0D9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Gm7432-201ENSMUST00000210343 879 ntBASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cx3cr1Q9Z0D9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cr1Q9Z0D9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cr1Q9Z0D9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.82■□□□□ 0.44
Cx3cr1Q9Z0D9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cx3cr1Q9Z0D9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cx3cr1Q9Z0D9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Gm44428-201ENSMUST00000204474 874 ntBASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cx3cr1Q9Z0D9 Gm11599-201ENSMUST00000118720 878 ntBASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cx3cr1Q9Z0D9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cx3cr1Q9Z0D9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.78■□□□□ 0.44
Cx3cr1Q9Z0D9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms