Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.3■■□□□ 1
RpgrQ9R0X5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.29■■□□□ 1
RpgrQ9R0X5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.29■■□□□ 1
RpgrQ9R0X5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.29■■□□□ 1
RpgrQ9R0X5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RpgrQ9R0X5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.28■■□□□ 1
RpgrQ9R0X5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RpgrQ9R0X5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RpgrQ9R0X5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RpgrQ9R0X5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RpgrQ9R0X5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RpgrQ9R0X5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RpgrQ9R0X5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RpgrQ9R0X5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RpgrQ9R0X5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RpgrQ9R0X5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RpgrQ9R0X5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RpgrQ9R0X5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RpgrQ9R0X5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RpgrQ9R0X5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RpgrQ9R0X5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RpgrQ9R0X5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RpgrQ9R0X5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RpgrQ9R0X5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RpgrQ9R0X5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RpgrQ9R0X5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RpgrQ9R0X5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.17■□□□□ 0.98
RpgrQ9R0X5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RpgrQ9R0X5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RpgrQ9R0X5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RpgrQ9R0X5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms