Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prg4Q9JM99 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prg4Q9JM99 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.39■□□□□ 0.7
Prg4Q9JM99 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Prg4Q9JM99 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Prg4Q9JM99 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.39■□□□□ 0.69
Prg4Q9JM99 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prg4Q9JM99 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.39■□□□□ 0.69
Prg4Q9JM99 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prg4Q9JM99 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prg4Q9JM99 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prg4Q9JM99 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prg4Q9JM99 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prg4Q9JM99 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prg4Q9JM99 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prg4Q9JM99 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prg4Q9JM99 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Prg4Q9JM99 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prg4Q9JM99 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prg4Q9JM99 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.36■□□□□ 0.69
Prg4Q9JM99 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prg4Q9JM99 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prg4Q9JM99 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prg4Q9JM99 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Prg4Q9JM99 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prg4Q9JM99 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.34■□□□□ 0.69
Prg4Q9JM99 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prg4Q9JM99 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prg4Q9JM99 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prg4Q9JM99 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prg4Q9JM99 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.33■□□□□ 0.69
Prg4Q9JM99 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.33■□□□□ 0.69
Prg4Q9JM99 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prg4Q9JM99 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prg4Q9JM99 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prg4Q9JM99 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prg4Q9JM99 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prg4Q9JM99 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.32■□□□□ 0.68
Prg4Q9JM99 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prg4Q9JM99 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Prg4Q9JM99 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prg4Q9JM99 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.31■□□□□ 0.68
Prg4Q9JM99 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Prg4Q9JM99 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prg4Q9JM99 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.3■□□□□ 0.68
Prg4Q9JM99 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prg4Q9JM99 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prg4Q9JM99 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prg4Q9JM99 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prg4Q9JM99 Gm22238-201ENSMUST00000175222 88 ntBASIC19.28■□□□□ 0.68
Prg4Q9JM99 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prg4Q9JM99 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prg4Q9JM99 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prg4Q9JM99 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prg4Q9JM99 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prg4Q9JM99 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prg4Q9JM99 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms