Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Crlf1Q9JM58 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crlf1Q9JM58 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crlf1Q9JM58 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.18■□□□□ 0.34
Crlf1Q9JM58 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Crlf1Q9JM58 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Crlf1Q9JM58 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Crlf1Q9JM58 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.16■□□□□ 0.34
Crlf1Q9JM58 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crlf1Q9JM58 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.15■□□□□ 0.34
Crlf1Q9JM58 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.15■□□□□ 0.34
Crlf1Q9JM58 Gm27405-201ENSMUST00000184201 112 ntBASIC17.15■□□□□ 0.34
Crlf1Q9JM58 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Crlf1Q9JM58 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Crlf1Q9JM58 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Gm9870-201ENSMUST00000063874 645 ntBASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Crlf1Q9JM58 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.14■□□□□ 0.33
Crlf1Q9JM58 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Crlf1Q9JM58 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.13■□□□□ 0.33
Crlf1Q9JM58 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Crlf1Q9JM58 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Crlf1Q9JM58 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Gm42569-201ENSMUST00000200539 472 ntBASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Crlf1Q9JM58 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Crlf1Q9JM58 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Crlf1Q9JM58 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Gm27011-201ENSMUST00000182352 972 ntBASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Crlf1Q9JM58 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crlf1Q9JM58 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Crlf1Q9JM58 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Crlf1Q9JM58 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Gm26571-201ENSMUST00000181399 666 ntBASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.07■□□□□ 0.32
Crlf1Q9JM58 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf1Q9JM58 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms