Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
Herpud2Q9JJC9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Herpud2Q9JJC9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Herpud2Q9JJC9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Herpud2Q9JJC9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Herpud2Q9JJC9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herpud2Q9JJC9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herpud2Q9JJC9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Herpud2Q9JJC9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.21■□□□□ 0.99
Herpud2Q9JJC9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Herpud2Q9JJC9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.2■□□□□ 0.98
Herpud2Q9JJC9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Herpud2Q9JJC9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Herpud2Q9JJC9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.2■□□□□ 0.98
Herpud2Q9JJC9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Herpud2Q9JJC9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Herpud2Q9JJC9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.19■□□□□ 0.98
Herpud2Q9JJC9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Herpud2Q9JJC9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Herpud2Q9JJC9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herpud2Q9JJC9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herpud2Q9JJC9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herpud2Q9JJC9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Herpud2Q9JJC9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Herpud2Q9JJC9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Herpud2Q9JJC9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.16■□□□□ 0.98
Herpud2Q9JJC9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Herpud2Q9JJC9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Herpud2Q9JJC9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Herpud2Q9JJC9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.15■□□□□ 0.98
Herpud2Q9JJC9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Herpud2Q9JJC9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Herpud2Q9JJC9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Herpud2Q9JJC9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Herpud2Q9JJC9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Herpud2Q9JJC9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Herpud2Q9JJC9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms