Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rtp4Q9ER80 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtp4Q9ER80 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtp4Q9ER80 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtp4Q9ER80 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.79■□□□□ 0.76
Rtp4Q9ER80 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtp4Q9ER80 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rtp4Q9ER80 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
Rtp4Q9ER80 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rtp4Q9ER80 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rtp4Q9ER80 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.77■□□□□ 0.75
Rtp4Q9ER80 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Gm10232-201ENSMUST00000089221 720 ntBASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp4Q9ER80 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rtp4Q9ER80 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rtp4Q9ER80 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp4Q9ER80 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rtp4Q9ER80 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp4Q9ER80 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp4Q9ER80 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp4Q9ER80 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp4Q9ER80 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Rtp4Q9ER80 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
Rtp4Q9ER80 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp4Q9ER80 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.7■□□□□ 0.74
Rtp4Q9ER80 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp4Q9ER80 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rtp4Q9ER80 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Rtp4Q9ER80 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp4Q9ER80 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp4Q9ER80 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp4Q9ER80 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtp4Q9ER80 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtp4Q9ER80 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms