Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldnd2Q9D9H2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldnd2Q9D9H2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldnd2Q9D9H2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cldnd2Q9D9H2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cldnd2Q9D9H2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldnd2Q9D9H2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldnd2Q9D9H2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.18■□□□□ 0.5
Cldnd2Q9D9H2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldnd2Q9D9H2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldnd2Q9D9H2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd2Q9D9H2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd2Q9D9H2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd2Q9D9H2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cldnd2Q9D9H2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.14■□□□□ 0.49
Cldnd2Q9D9H2 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.14■□□□□ 0.49
Cldnd2Q9D9H2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd2Q9D9H2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd2Q9D9H2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd2Q9D9H2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd2Q9D9H2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd2Q9D9H2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd2Q9D9H2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd2Q9D9H2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd2Q9D9H2 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd2Q9D9H2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms