Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShpkQ9D5J6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ShpkQ9D5J6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShpkQ9D5J6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShpkQ9D5J6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.67■□□□□ 0.42
ShpkQ9D5J6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShpkQ9D5J6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Zfp131-205ENSMUST00000223812 663 ntBASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShpkQ9D5J6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShpkQ9D5J6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShpkQ9D5J6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShpkQ9D5J6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShpkQ9D5J6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.62■□□□□ 0.41
ShpkQ9D5J6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShpkQ9D5J6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ShpkQ9D5J6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Gm9397-201ENSMUST00000200125 605 ntBASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ShpkQ9D5J6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ShpkQ9D5J6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ShpkQ9D5J6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShpkQ9D5J6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.59■□□□□ 0.41
ShpkQ9D5J6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.59■□□□□ 0.41
ShpkQ9D5J6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ShpkQ9D5J6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ShpkQ9D5J6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
ShpkQ9D5J6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ShpkQ9D5J6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.58■□□□□ 0.4
ShpkQ9D5J6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.58■□□□□ 0.4
ShpkQ9D5J6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ShpkQ9D5J6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ShpkQ9D5J6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.58■□□□□ 0.4
ShpkQ9D5J6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ShpkQ9D5J6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms