Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssbp3Q9D032 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Gm14117-201ENSMUST00000122417 843 ntBASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp3Q9D032 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Etf1-202ENSMUST00000180351 108 ntBASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp3Q9D032 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssbp3Q9D032 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Ssbp3Q9D032 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.53■□□□□ 0.4
Ssbp3Q9D032 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.53■□□□□ 0.4
Ssbp3Q9D032 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.52■□□□□ 0.4
Ssbp3Q9D032 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp3Q9D032 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp3Q9D032 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp3Q9D032 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.52■□□□□ 0.4
Ssbp3Q9D032 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp3Q9D032 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ssbp3Q9D032 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ssbp3Q9D032 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp3Q9D032 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp3Q9D032 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Gm7417-201ENSMUST00000192950 473 ntBASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp3Q9D032 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Gm10399-202ENSMUST00000202768 748 ntBASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp3Q9D032 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms