Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Nsd1-206ENSMUST00000224918 1001 ntBASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61bQ9CQS8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61bQ9CQS8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Gm12821-201ENSMUST00000120022 600 ntBASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sec61bQ9CQS8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61bQ9CQS8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61bQ9CQS8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61bQ9CQS8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms