Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.96■□□□□ 0.95
Clcc1Q99LI2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcc1Q99LI2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Clcc1Q99LI2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Clcc1Q99LI2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcc1Q99LI2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcc1Q99LI2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcc1Q99LI2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcc1Q99LI2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcc1Q99LI2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcc1Q99LI2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcc1Q99LI2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcc1Q99LI2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcc1Q99LI2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clcc1Q99LI2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Clcc1Q99LI2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clcc1Q99LI2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Clcc1Q99LI2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcc1Q99LI2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.88■□□□□ 0.93
Clcc1Q99LI2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Clcc1Q99LI2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcc1Q99LI2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcc1Q99LI2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.87■□□□□ 0.93
Clcc1Q99LI2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcc1Q99LI2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcc1Q99LI2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Clcc1Q99LI2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcc1Q99LI2 Gm22238-201ENSMUST00000175222 88 ntBASIC20.84■□□□□ 0.93
Clcc1Q99LI2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clcc1Q99LI2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Clcc1Q99LI2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.84■□□□□ 0.93
Clcc1Q99LI2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcc1Q99LI2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clcc1Q99LI2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clcc1Q99LI2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcc1Q99LI2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcc1Q99LI2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcc1Q99LI2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms