Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Thumpd1Q99J36 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thumpd1Q99J36 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.86■□□□□ 0.61
Thumpd1Q99J36 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd1Q99J36 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd1Q99J36 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd1Q99J36 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thumpd1Q99J36 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Thumpd1Q99J36 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd1Q99J36 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Thumpd1Q99J36 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Thumpd1Q99J36 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd1Q99J36 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd1Q99J36 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd1Q99J36 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd1Q99J36 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thumpd1Q99J36 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thumpd1Q99J36 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd1Q99J36 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd1Q99J36 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.8■□□□□ 0.6
Thumpd1Q99J36 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd1Q99J36 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd1Q99J36 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd1Q99J36 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd1Q99J36 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd1Q99J36 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd1Q99J36 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd1Q99J36 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd1Q99J36 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.77■□□□□ 0.6
Thumpd1Q99J36 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd1Q99J36 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd1Q99J36 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd1Q99J36 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Thumpd1Q99J36 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd1Q99J36 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd1Q99J36 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd1Q99J36 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd1Q99J36 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.76■□□□□ 0.59
Thumpd1Q99J36 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.76■□□□□ 0.59
Thumpd1Q99J36 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd1Q99J36 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd1Q99J36 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd1Q99J36 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd1Q99J36 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Thumpd1Q99J36 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd1Q99J36 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms