Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhac1Q91Y10 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhac1Q91Y10 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhac1Q91Y10 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhac1Q91Y10 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhac1Q91Y10 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhac1Q91Y10 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhac1Q91Y10 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac1Q91Y10 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhac1Q91Y10 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhac1Q91Y10 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhac1Q91Y10 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhac1Q91Y10 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhac1Q91Y10 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhac1Q91Y10 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhac1Q91Y10 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhac1Q91Y10 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhac1Q91Y10 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Gm10420-201ENSMUST00000121713 882 ntBASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhac1Q91Y10 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhac1Q91Y10 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhac1Q91Y10 Notumos-201ENSMUST00000151998 2659 ntBASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms