Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb5Q91XZ5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Pcdhb5Q91XZ5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Pcdhb5Q91XZ5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb5Q91XZ5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb5Q91XZ5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb5Q91XZ5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 Gm12821-201ENSMUST00000120022 600 ntBASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb5Q91XZ5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb5Q91XZ5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb5Q91XZ5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb5Q91XZ5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb5Q91XZ5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.61
Pcdhb5Q91XZ5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb5Q91XZ5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb5Q91XZ5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb5Q91XZ5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb5Q91XZ5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb5Q91XZ5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdhb5Q91XZ5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdhb5Q91XZ5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb5Q91XZ5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Pcdhb5Q91XZ5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhb5Q91XZ5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb5Q91XZ5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb5Q91XZ5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcdhb5Q91XZ5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Pcdhb5Q91XZ5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb5Q91XZ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb5Q91XZ5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb5Q91XZ5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pcdhb5Q91XZ5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pcdhb5Q91XZ5 Gm27454-201ENSMUST00000185090 204 ntBASIC25.08■■□□□ 1.61
Pcdhb5Q91XZ5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb5Q91XZ5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhb5Q91XZ5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Pcdhb5Q91XZ5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Pcdhb5Q91XZ5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.07■■□□□ 1.6
Pcdhb5Q91XZ5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.06■■□□□ 1.6
Pcdhb5Q91XZ5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb5Q91XZ5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb5Q91XZ5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.04■■□□□ 1.6
Pcdhb5Q91XZ5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
Pcdhb5Q91XZ5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
Pcdhb5Q91XZ5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb5Q91XZ5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb5Q91XZ5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb5Q91XZ5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Gm45417-201ENSMUST00000209533 758 ntBASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms