Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssx2ipQ8VC66 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssx2ipQ8VC66 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ssx2ipQ8VC66 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.54■■□□□ 1.04
Ssx2ipQ8VC66 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.54■■□□□ 1.04
Ssx2ipQ8VC66 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ssx2ipQ8VC66 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssx2ipQ8VC66 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ssx2ipQ8VC66 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ssx2ipQ8VC66 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ssx2ipQ8VC66 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssx2ipQ8VC66 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.49■■□□□ 1.03
Ssx2ipQ8VC66 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssx2ipQ8VC66 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssx2ipQ8VC66 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ssx2ipQ8VC66 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssx2ipQ8VC66 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssx2ipQ8VC66 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ssx2ipQ8VC66 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssx2ipQ8VC66 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssx2ipQ8VC66 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ssx2ipQ8VC66 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ssx2ipQ8VC66 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ssx2ipQ8VC66 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssx2ipQ8VC66 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ssx2ipQ8VC66 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Ssx2ipQ8VC66 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
Ssx2ipQ8VC66 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Gm5921-201ENSMUST00000075898 882 ntBASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ssx2ipQ8VC66 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ssx2ipQ8VC66 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms