Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps39Q8R5L3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps39Q8R5L3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Vps39Q8R5L3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps39Q8R5L3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vps39Q8R5L3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps39Q8R5L3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.19■□□□□ 0.98
Vps39Q8R5L3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps39Q8R5L3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps39Q8R5L3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps39Q8R5L3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps39Q8R5L3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps39Q8R5L3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps39Q8R5L3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps39Q8R5L3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps39Q8R5L3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps39Q8R5L3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Vps39Q8R5L3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps39Q8R5L3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps39Q8R5L3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps39Q8R5L3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps39Q8R5L3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps39Q8R5L3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps39Q8R5L3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.13■□□□□ 0.97
Vps39Q8R5L3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Vps39Q8R5L3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.13■□□□□ 0.97
Vps39Q8R5L3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps39Q8R5L3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps39Q8R5L3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps39Q8R5L3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.12■□□□□ 0.97
Vps39Q8R5L3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.12■□□□□ 0.97
Vps39Q8R5L3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps39Q8R5L3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.12■□□□□ 0.97
Vps39Q8R5L3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Vps39Q8R5L3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps39Q8R5L3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps39Q8R5L3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps39Q8R5L3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.08■□□□□ 0.97
Vps39Q8R5L3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Vps39Q8R5L3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps39Q8R5L3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps39Q8R5L3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps39Q8R5L3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps39Q8R5L3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps39Q8R5L3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps39Q8R5L3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.06■□□□□ 0.96
Vps39Q8R5L3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps39Q8R5L3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps39Q8R5L3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps39Q8R5L3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms