Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3kbp1Q8R550 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3kbp1Q8R550 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3kbp1Q8R550 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3kbp1Q8R550 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3kbp1Q8R550 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3kbp1Q8R550 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3kbp1Q8R550 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3kbp1Q8R550 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3kbp1Q8R550 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.72■■□□□ 1.07
Sh3kbp1Q8R550 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.72■■□□□ 1.07
Sh3kbp1Q8R550 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.72■■□□□ 1.07
Sh3kbp1Q8R550 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sh3kbp1Q8R550 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3kbp1Q8R550 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3kbp1Q8R550 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.68■■□□□ 1.06
Sh3kbp1Q8R550 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3kbp1Q8R550 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3kbp1Q8R550 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.65■■□□□ 1.06
Sh3kbp1Q8R550 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms