Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Hbp1Q8R316 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Gm10620-201ENSMUST00000098379 1332 ntBASIC21■□□□□ 0.95
Hbp1Q8R316 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hbp1Q8R316 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hbp1Q8R316 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.98■□□□□ 0.95
Hbp1Q8R316 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hbp1Q8R316 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.97■□□□□ 0.95
Hbp1Q8R316 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Hbp1Q8R316 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hbp1Q8R316 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hbp1Q8R316 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hbp1Q8R316 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbp1Q8R316 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hbp1Q8R316 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hbp1Q8R316 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hbp1Q8R316 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hbp1Q8R316 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hbp1Q8R316 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hbp1Q8R316 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.9■□□□□ 0.94
Hbp1Q8R316 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hbp1Q8R316 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hbp1Q8R316 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hbp1Q8R316 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hbp1Q8R316 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.89■□□□□ 0.93
Hbp1Q8R316 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hbp1Q8R316 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hbp1Q8R316 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Hbp1Q8R316 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hbp1Q8R316 Gm9847-201ENSMUST00000052528 599 ntBASIC20.89■□□□□ 0.93
Hbp1Q8R316 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hbp1Q8R316 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hbp1Q8R316 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hbp1Q8R316 Gm13241-201ENSMUST00000094493 780 ntBASIC20.88■□□□□ 0.93
Hbp1Q8R316 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hbp1Q8R316 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms