Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zcchc9Q8R1J3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Zcchc9Q8R1J3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.09■□□□□ 0.97
Zcchc9Q8R1J3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Zcchc9Q8R1J3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.08■□□□□ 0.97
Zcchc9Q8R1J3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.08■□□□□ 0.97
Zcchc9Q8R1J3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zcchc9Q8R1J3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zcchc9Q8R1J3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zcchc9Q8R1J3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zcchc9Q8R1J3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zcchc9Q8R1J3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Zcchc9Q8R1J3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.06■□□□□ 0.96
Zcchc9Q8R1J3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zcchc9Q8R1J3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zcchc9Q8R1J3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 Gm21956-201ENSMUST00000179946 522 ntBASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zcchc9Q8R1J3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zcchc9Q8R1J3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.03■□□□□ 0.96
Zcchc9Q8R1J3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.03■□□□□ 0.96
Zcchc9Q8R1J3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zcchc9Q8R1J3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zcchc9Q8R1J3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Zcchc9Q8R1J3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Gm10399-202ENSMUST00000202768 748 ntBASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Zcchc9Q8R1J3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Zcchc9Q8R1J3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Zcchc9Q8R1J3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Zcchc9Q8R1J3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zcchc9Q8R1J3 Gm38160-201ENSMUST00000193090 2499 ntBASIC21■□□□□ 0.95
Zcchc9Q8R1J3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zcchc9Q8R1J3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zcchc9Q8R1J3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zcchc9Q8R1J3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zcchc9Q8R1J3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zcchc9Q8R1J3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zcchc9Q8R1J3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zcchc9Q8R1J3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms