Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Gm9870-201ENSMUST00000063874 645 ntBASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col23a1Q8K4G2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col23a1Q8K4G2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Col23a1Q8K4G2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col23a1Q8K4G2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Col23a1Q8K4G2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col23a1Q8K4G2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.47■■□□□ 1.83
Col23a1Q8K4G2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col23a1Q8K4G2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col23a1Q8K4G2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.46■■□□□ 1.83
Col23a1Q8K4G2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col23a1Q8K4G2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.45■■□□□ 1.83
Col23a1Q8K4G2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.45■■□□□ 1.82
Col23a1Q8K4G2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Gm26571-201ENSMUST00000181399 666 ntBASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col23a1Q8K4G2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.43■■□□□ 1.82
Col23a1Q8K4G2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col23a1Q8K4G2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col23a1Q8K4G2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Col23a1Q8K4G2 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.42■■□□□ 1.82
Col23a1Q8K4G2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col23a1Q8K4G2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col23a1Q8K4G2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col23a1Q8K4G2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col23a1Q8K4G2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Col23a1Q8K4G2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col23a1Q8K4G2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col23a1Q8K4G2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.39■■□□□ 1.82
Col23a1Q8K4G2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col23a1Q8K4G2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Gm27011-201ENSMUST00000182352 972 ntBASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Gm27405-201ENSMUST00000184201 112 ntBASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Gm43173-201ENSMUST00000202246 593 ntBASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col23a1Q8K4G2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col23a1Q8K4G2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.36■■□□□ 1.81
Col23a1Q8K4G2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Col23a1Q8K4G2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Col23a1Q8K4G2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col23a1Q8K4G2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col23a1Q8K4G2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Col23a1Q8K4G2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Col23a1Q8K4G2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.33■■□□□ 1.81
Col23a1Q8K4G2 Gm42569-201ENSMUST00000200539 472 ntBASIC26.33■■□□□ 1.81
Col23a1Q8K4G2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Col23a1Q8K4G2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Col23a1Q8K4G2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Col23a1Q8K4G2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col23a1Q8K4G2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Col23a1Q8K4G2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col23a1Q8K4G2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.31■■□□□ 1.8
Col23a1Q8K4G2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Col23a1Q8K4G2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Col23a1Q8K4G2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col23a1Q8K4G2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col23a1Q8K4G2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Col23a1Q8K4G2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col23a1Q8K4G2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Col23a1Q8K4G2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col23a1Q8K4G2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms