Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Gm27454-201ENSMUST00000185090 204 ntBASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trpm6Q8CIR4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trpm6Q8CIR4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trpm6Q8CIR4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Trpm6Q8CIR4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trpm6Q8CIR4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trpm6Q8CIR4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Trpm6Q8CIR4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trpm6Q8CIR4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trpm6Q8CIR4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.44■■□□□ 1.02
Trpm6Q8CIR4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trpm6Q8CIR4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trpm6Q8CIR4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Gm12821-201ENSMUST00000120022 600 ntBASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trpm6Q8CIR4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Gm45417-201ENSMUST00000209533 758 ntBASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trpm6Q8CIR4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpm6Q8CIR4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trpm6Q8CIR4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trpm6Q8CIR4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trpm6Q8CIR4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trpm6Q8CIR4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.39■■□□□ 1.02
Trpm6Q8CIR4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trpm6Q8CIR4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm6Q8CIR4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.37■■□□□ 1.01
Trpm6Q8CIR4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm6Q8CIR4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trpm6Q8CIR4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm6Q8CIR4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm6Q8CIR4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm6Q8CIR4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm6Q8CIR4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm6Q8CIR4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.35■■□□□ 1.01
Trpm6Q8CIR4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm6Q8CIR4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm6Q8CIR4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms