Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc5Q8CG46 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Smc5Q8CG46 Gm11687-201ENSMUST00000118911 886 ntBASIC26.36■■□□□ 1.81
Smc5Q8CG46 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Smc5Q8CG46 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC26.35■■□□□ 1.81
Smc5Q8CG46 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smc5Q8CG46 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smc5Q8CG46 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smc5Q8CG46 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smc5Q8CG46 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc5Q8CG46 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Smc5Q8CG46 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc5Q8CG46 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc5Q8CG46 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc5Q8CG46 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc5Q8CG46 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC26.32■■□□□ 1.8
Smc5Q8CG46 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc5Q8CG46 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc5Q8CG46 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc5Q8CG46 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Smc5Q8CG46 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc5Q8CG46 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smc5Q8CG46 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Smc5Q8CG46 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc5Q8CG46 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc5Q8CG46 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.28■■□□□ 1.8
Smc5Q8CG46 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc5Q8CG46 Notumos-201ENSMUST00000151998 2659 ntBASIC26.28■■□□□ 1.8
Smc5Q8CG46 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Smc5Q8CG46 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc5Q8CG46 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc5Q8CG46 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc5Q8CG46 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Smc5Q8CG46 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc5Q8CG46 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc5Q8CG46 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Smc5Q8CG46 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc5Q8CG46 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc5Q8CG46 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Smc5Q8CG46 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Smc5Q8CG46 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smc5Q8CG46 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Smc5Q8CG46 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc5Q8CG46 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc5Q8CG46 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc5Q8CG46 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Smc5Q8CG46 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Smc5Q8CG46 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.22■■□□□ 1.79
Smc5Q8CG46 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.21■■□□□ 1.79
Smc5Q8CG46 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Smc5Q8CG46 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smc5Q8CG46 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smc5Q8CG46 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.21■■□□□ 1.79
Smc5Q8CG46 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Smc5Q8CG46 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Smc5Q8CG46 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Smc5Q8CG46 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Smc5Q8CG46 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc5Q8CG46 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc5Q8CG46 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc5Q8CG46 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Smc5Q8CG46 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Smc5Q8CG46 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.19■■□□□ 1.78
Smc5Q8CG46 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Smc5Q8CG46 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Smc5Q8CG46 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc5Q8CG46 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc5Q8CG46 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.18■■□□□ 1.78
Smc5Q8CG46 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc5Q8CG46 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.17■■□□□ 1.78
Smc5Q8CG46 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc5Q8CG46 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms