Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Pabpn1Q8CCS6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pabpn1Q8CCS6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pabpn1Q8CCS6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Pabpn1Q8CCS6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Pabpn1Q8CCS6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC34.25■■■■□ 3.07
Pabpn1Q8CCS6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Pabpn1Q8CCS6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC34.24■■■■□ 3.07
Pabpn1Q8CCS6 Gm9870-201ENSMUST00000063874 645 ntBASIC34.24■■■■□ 3.07
Pabpn1Q8CCS6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Pabpn1Q8CCS6 Gm5576-201ENSMUST00000075809 1236 ntBASIC34.23■■■■□ 3.07
Pabpn1Q8CCS6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Pabpn1Q8CCS6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Pabpn1Q8CCS6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Pabpn1Q8CCS6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
Pabpn1Q8CCS6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Pabpn1Q8CCS6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC34.21■■■■□ 3.07
Pabpn1Q8CCS6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pabpn1Q8CCS6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pabpn1Q8CCS6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Pabpn1Q8CCS6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC34.2■■■■□ 3.07
Pabpn1Q8CCS6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pabpn1Q8CCS6 Gm43060-201ENSMUST00000200621 289 ntBASIC34.2■■■■□ 3.07
Pabpn1Q8CCS6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pabpn1Q8CCS6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC34.19■■■■□ 3.06
Pabpn1Q8CCS6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
Pabpn1Q8CCS6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Pabpn1Q8CCS6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
Pabpn1Q8CCS6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC34.17■■■■□ 3.06
Pabpn1Q8CCS6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Gm10129-202ENSMUST00000193100 1316 ntBASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Pabpn1Q8CCS6 Gm26833-201ENSMUST00000180899 440 ntBASIC34.15■■■■□ 3.06
Pabpn1Q8CCS6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC34.15■■■■□ 3.06
Pabpn1Q8CCS6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pabpn1Q8CCS6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 Gm10602-201ENSMUST00000098239 609 ntBASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pabpn1Q8CCS6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Gm12251-201ENSMUST00000117893 792 ntBASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Zxda-201ENSMUST00000117281 2621 ntBASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC34.13■■■■□ 3.05
Pabpn1Q8CCS6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC34.12■■■■□ 3.05
Pabpn1Q8CCS6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC34.12■■■■□ 3.05
Pabpn1Q8CCS6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC34.12■■■■□ 3.05
Pabpn1Q8CCS6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC34.12■■■■□ 3.05
Pabpn1Q8CCS6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC34.11■■■■□ 3.05
Pabpn1Q8CCS6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC34.11■■■■□ 3.05
Pabpn1Q8CCS6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC34.1■■■■□ 3.05
Pabpn1Q8CCS6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Pabpn1Q8CCS6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Pabpn1Q8CCS6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Pabpn1Q8CCS6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.09■■■■□ 3.05
Pabpn1Q8CCS6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Pabpn1Q8CCS6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC34.08■■■■□ 3.05
Pabpn1Q8CCS6 Nespas-201ENSMUST00000143738 1083 ntBASIC34.08■■■■□ 3.05
Pabpn1Q8CCS6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC34.08■■■■□ 3.05
Pabpn1Q8CCS6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC34.08■■■■□ 3.05
Pabpn1Q8CCS6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.04
Pabpn1Q8CCS6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Pabpn1Q8CCS6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC34.07■■■■□ 3.04
Pabpn1Q8CCS6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 AV356131-201ENSMUST00000206201 750 ntBASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 Gm18671-201ENSMUST00000214826 683 ntBASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pabpn1Q8CCS6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Pabpn1Q8CCS6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC34.05■■■■□ 3.04
Pabpn1Q8CCS6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC34.05■■■■□ 3.04
Pabpn1Q8CCS6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Pabpn1Q8CCS6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC34.04■■■■□ 3.04
Pabpn1Q8CCS6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC34.04■■■■□ 3.04
Pabpn1Q8CCS6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pabpn1Q8CCS6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pabpn1Q8CCS6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pabpn1Q8CCS6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Pabpn1Q8CCS6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 Gm10033-202ENSMUST00000211874 928 ntBASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC34.02■■■■□ 3.04
Pabpn1Q8CCS6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Pabpn1Q8CCS6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC34.01■■■■□ 3.03
Pabpn1Q8CCS6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Pabpn1Q8CCS6 Gm10252-201ENSMUST00000209541 832 ntBASIC33.99■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms