Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cps1Q8C196 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Cps1Q8C196 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC29.37■■■□□ 2.29
Cps1Q8C196 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cps1Q8C196 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC29.37■■■□□ 2.29
Cps1Q8C196 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cps1Q8C196 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Cps1Q8C196 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cps1Q8C196 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cps1Q8C196 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cps1Q8C196 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cps1Q8C196 Gm18284-201ENSMUST00000172604 624 ntBASIC29.35■■■□□ 2.29
Cps1Q8C196 AC116713.1-201ENSMUST00000215074 430 ntBASIC29.35■■■□□ 2.29
Cps1Q8C196 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cps1Q8C196 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Cps1Q8C196 Gm9207-201ENSMUST00000198773 1115 ntBASIC29.35■■■□□ 2.29
Cps1Q8C196 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Cps1Q8C196 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Cps1Q8C196 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Cps1Q8C196 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Cps1Q8C196 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cps1Q8C196 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cps1Q8C196 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Cps1Q8C196 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Cps1Q8C196 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Cps1Q8C196 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cps1Q8C196 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Cps1Q8C196 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC29.32■■■□□ 2.28
Cps1Q8C196 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cps1Q8C196 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Cps1Q8C196 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cps1Q8C196 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Cps1Q8C196 Gm6139-201ENSMUST00000079261 882 ntBASIC29.32■■■□□ 2.28
Cps1Q8C196 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cps1Q8C196 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cps1Q8C196 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cps1Q8C196 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cps1Q8C196 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Cps1Q8C196 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Cps1Q8C196 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Cps1Q8C196 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC29.3■■■□□ 2.28
Cps1Q8C196 Gm8495-201ENSMUST00000188740 694 ntBASIC29.3■■■□□ 2.28
Cps1Q8C196 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cps1Q8C196 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC29.3■■■□□ 2.28
Cps1Q8C196 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cps1Q8C196 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC29.3■■■□□ 2.28
Cps1Q8C196 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Cps1Q8C196 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Cps1Q8C196 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Cps1Q8C196 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Cps1Q8C196 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cps1Q8C196 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cps1Q8C196 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Cps1Q8C196 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC29.27■■■□□ 2.28
Cps1Q8C196 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Cps1Q8C196 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC29.27■■■□□ 2.28
Cps1Q8C196 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Cps1Q8C196 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Cps1Q8C196 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC29.26■■■□□ 2.27
Cps1Q8C196 AC158990.1-201ENSMUST00000221450 2016 ntBASIC29.26■■■□□ 2.27
Cps1Q8C196 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cps1Q8C196 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Cps1Q8C196 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
Cps1Q8C196 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cps1Q8C196 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cps1Q8C196 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC29.25■■■□□ 2.27
Cps1Q8C196 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cps1Q8C196 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Cps1Q8C196 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Cps1Q8C196 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Cps1Q8C196 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cps1Q8C196 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Cps1Q8C196 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cps1Q8C196 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Cps1Q8C196 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Cps1Q8C196 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cps1Q8C196 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cps1Q8C196 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cps1Q8C196 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cps1Q8C196 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Cps1Q8C196 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Cps1Q8C196 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
Cps1Q8C196 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Cps1Q8C196 Gm43017-201ENSMUST00000198296 752 ntBASIC29.2■■■□□ 2.27
Cps1Q8C196 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Cps1Q8C196 Flvcr1-202ENSMUST00000191946 1216 ntBASIC29.2■■■□□ 2.26
Cps1Q8C196 Gm43137-201ENSMUST00000198052 594 ntBASIC29.2■■■□□ 2.26
Cps1Q8C196 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Cps1Q8C196 Gm9870-201ENSMUST00000063874 645 ntBASIC29.2■■■□□ 2.26
Cps1Q8C196 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cps1Q8C196 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cps1Q8C196 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cps1Q8C196 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cps1Q8C196 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC29.19■■■□□ 2.26
Cps1Q8C196 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms