Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Rab11fip4Q8BQP8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Gm45102-201ENSMUST00000207427 857 ntBASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rab11fip4Q8BQP8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.36■■□□□ 1.33
Rab11fip4Q8BQP8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Gm14117-201ENSMUST00000122417 843 ntBASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab11fip4Q8BQP8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Gm10232-201ENSMUST00000089221 720 ntBASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rab11fip4Q8BQP8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.33■■□□□ 1.33
Rab11fip4Q8BQP8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rab11fip4Q8BQP8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rab11fip4Q8BQP8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.32■■□□□ 1.32
Rab11fip4Q8BQP8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab11fip4Q8BQP8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rab11fip4Q8BQP8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab11fip4Q8BQP8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rab11fip4Q8BQP8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.31■■□□□ 1.32
Rab11fip4Q8BQP8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab11fip4Q8BQP8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab11fip4Q8BQP8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 Gm9959-201ENSMUST00000068277 390 ntBASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab11fip4Q8BQP8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab11fip4Q8BQP8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab11fip4Q8BQP8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab11fip4Q8BQP8 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.28■■□□□ 1.32
Rab11fip4Q8BQP8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab11fip4Q8BQP8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab11fip4Q8BQP8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab11fip4Q8BQP8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab11fip4Q8BQP8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab11fip4Q8BQP8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.27■■□□□ 1.31
Rab11fip4Q8BQP8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab11fip4Q8BQP8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rab11fip4Q8BQP8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rab11fip4Q8BQP8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rab11fip4Q8BQP8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Rab11fip4Q8BQP8 Gm15039-201ENSMUST00000118914 875 ntBASIC23.23■■□□□ 1.31
Rab11fip4Q8BQP8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms