Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.47■■□□□ 1.03
Sfr1Q8BP27 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sfr1Q8BP27 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Sfr1Q8BP27 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sfr1Q8BP27 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Gm15546-201ENSMUST00000122095 826 ntBASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sfr1Q8BP27 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Sfr1Q8BP27 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sfr1Q8BP27 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Sfr1Q8BP27 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sfr1Q8BP27 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Gm10232-201ENSMUST00000089221 720 ntBASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sfr1Q8BP27 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sfr1Q8BP27 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.42■■□□□ 1.02
Sfr1Q8BP27 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sfr1Q8BP27 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sfr1Q8BP27 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sfr1Q8BP27 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sfr1Q8BP27 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sfr1Q8BP27 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Sfr1Q8BP27 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.41■■□□□ 1.02
Sfr1Q8BP27 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sfr1Q8BP27 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sfr1Q8BP27 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.4■■□□□ 1.02
Sfr1Q8BP27 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sfr1Q8BP27 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sfr1Q8BP27 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sfr1Q8BP27 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sfr1Q8BP27 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sfr1Q8BP27 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sfr1Q8BP27 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sfr1Q8BP27 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sfr1Q8BP27 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sfr1Q8BP27 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sfr1Q8BP27 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Sfr1Q8BP27 Gm15820-201ENSMUST00000201566 728 ntBASIC21.38■■□□□ 1.01
Sfr1Q8BP27 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sfr1Q8BP27 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sfr1Q8BP27 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sfr1Q8BP27 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.37■■□□□ 1.01
Sfr1Q8BP27 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sfr1Q8BP27 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sfr1Q8BP27 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sfr1Q8BP27 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sfr1Q8BP27 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sfr1Q8BP27 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sfr1Q8BP27 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sfr1Q8BP27 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sfr1Q8BP27 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.35■■□□□ 1.01
Sfr1Q8BP27 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sfr1Q8BP27 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sfr1Q8BP27 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sfr1Q8BP27 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sfr1Q8BP27 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sfr1Q8BP27 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sfr1Q8BP27 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Sfr1Q8BP27 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sfr1Q8BP27 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.32■■□□□ 1
Sfr1Q8BP27 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sfr1Q8BP27 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.32■■□□□ 1
Sfr1Q8BP27 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sfr1Q8BP27 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sfr1Q8BP27 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sfr1Q8BP27 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sfr1Q8BP27 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.31■■□□□ 1
Sfr1Q8BP27 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sfr1Q8BP27 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms