Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ccdc40Q8BI79 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ccdc40Q8BI79 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc40Q8BI79 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc40Q8BI79 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.9■■□□□ 1.1
Ccdc40Q8BI79 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.9■■□□□ 1.1
Ccdc40Q8BI79 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Ccdc40Q8BI79 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc40Q8BI79 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc40Q8BI79 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc40Q8BI79 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc40Q8BI79 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc40Q8BI79 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.88■■□□□ 1.09
Ccdc40Q8BI79 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc40Q8BI79 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ccdc40Q8BI79 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc40Q8BI79 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc40Q8BI79 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc40Q8BI79 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ccdc40Q8BI79 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc40Q8BI79 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc40Q8BI79 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc40Q8BI79 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc40Q8BI79 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.83■■□□□ 1.09
Ccdc40Q8BI79 Cap2-205ENSMUST00000225824 1634 ntBASIC21.83■■□□□ 1.08
Ccdc40Q8BI79 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ccdc40Q8BI79 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc40Q8BI79 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ccdc40Q8BI79 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc40Q8BI79 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.81■■□□□ 1.08
Ccdc40Q8BI79 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc40Q8BI79 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc40Q8BI79 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc40Q8BI79 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc40Q8BI79 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc40Q8BI79 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc40Q8BI79 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc40Q8BI79 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc40Q8BI79 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc40Q8BI79 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms